William Sheffler: search on Z-Library

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1

Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home

Rhiju Das, Bin Qian, Srivatsan Raman, Robert Vernon, James Thompson, Philip Bradley, Sagar Khare, Michael D. Tyka, Divya Bhat, Dylan Chivian, David E. Kim, William H. Sheffler, Lars Malmström, Andrew

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 808 KB

english, 2007

2

Novel GlyT1 inhibitor chemotypes by scaffold hopping. Part 1: Development of a potent and CNS penetrant [3.1.0]-based lead

Jones, Carrie K., Sheffler, Douglas J., Williams, Richard, Jadhav, Sataya B., Felts, Andrew S., Morrison, Ryan D., Niswender, Colleen M., Daniels, J. Scott, Conn, P. Jeffrey, Lindsley, Craig W.

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 1.70 MB

english, 2014

3

Accurate computational design of multipass transmembrane proteins

Lu, Peilong, Min, Duyoung, DiMaio, Frank, Wei, Kathy Y., Vahey, Michael D., Boyken, Scott E., Chen, Zibo, Fallas, Jorge A., Ueda, George, Sheffler, William, Mulligan, Vikram Khipple, Xu, Wenqing, Bowi

Journal:

Year:

2018

Language:

english

File:

PDF, 1.65 MB

english, 2018

4

De novo design of self-assembling helical protein filaments

Shen, Hao, Fallas, Jorge A., Lynch, Eric, Sheffler, William, Parry, Bradley, Jannetty, Nicholas, Decarreau, Justin, Wagenbach, Michael, Vicente, Juan Jesus, Chen, Jiajun, Wang, Lei, Dowling, Quinton,

Journal:

Year:

2018

Language:

english

File:

PDF, 1.66 MB

english, 2018

5

Synthesis and SAR of selective muscarinic acetylcholine receptor subtype 1 (M1 mAChR) antagonists

L. Michelle Lewis, Douglas Sheffler, Richard Williams, Thomas M. Bridges, J. Phillip Kennedy, J.T. Brogan, Matthew J. Mulder, Lyndsey Williams, Natalia T. Nalywajko, Colleen M. Niswender, Charles D. W

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2008

Language:

english

File:

PDF, 208 KB

english, 2008

6

RosettaHoles2: A volumetric packing measure for protein structure refinement and validation

William Sheffler, David Baker

Journal:

Protein Science

Year:

2010

Language:

english

File:

PDF, 327 KB

english, 2010

7

Ranking predicted protein structures with support vector regression

Jian Qiu, Will Sheffler, David Baker, William Stafford Noble

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 321 KB

english, 2008

8

Modeling Disordered Regions in Proteins Using Rosetta

Wang, Ray Yu-Ruei, Han, Yan, Krassovsky, Kristina, Sheffler, William, Tyka, Michael, Baker, David, Uversky, Vladimir N.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.25 MB

english, 2011

9

Novel GlyT1 inhibitor chemotypes by scaffold hopping. Part 2: Development of a [3.3.0]-based series and other piperidine bioisosteres

Sheffler, Douglas J., Nedelovych, Michael T., Williams, Richard, Turner, Stephen C., Duerk, Brittany B., Robbins, Megan R., Jadhav, Sataya B., Niswender, Colleen M., Jones, Carrie K., Conn, P. Jeffrey

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 2.21 MB

english, 2014

10

Accurate design of co-assembling multi-component protein nanomaterials

King, Neil P., Bale, Jacob B., Sheffler, William, McNamara, Dan E., Gonen, Shane, Gonen, Tamir, Yeates, Todd O., Baker, David

Journal:

Year:

2014

Language:

english

File:

PDF, 11.13 MB

english, 2014

11

Symmetry-Based Design and Structure of Self-Assembling Protein Cages and Nanomaterials

Lai, Yen-Ting, King, Neil P., Sheffler, William, McNamara, Dan E., Bale, Jacob B., Baker, David, Yeates, Todd O.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 36 KB

english, 2014

12

Accelerated electron transport from photosystem I to redox partners by covalently linked ferredoxin

Wittenberg, Gal, Sheffler, William, Darchi, Dana, Baker, David, Noy, Dror

Journal:

Physical Chemistry Chemical Physics

Year:

2013

Language:

english

File:

PDF, 1.73 MB

english, 2013

13

mGluR5 Positive Allosteric Modulators Facilitate both Hippocampal LTP and LTD and Enhance Spatial Learning

Ayala, Jennifer E, Chen, Yelin, Banko, Jessica L, Sheffler, Douglas J, Williams, Richard, Telk, Alexandra N, Watson, Noreen L, Xiang, Zixiu, Zhang, Yongqin, Jones, Paulianda J, Lindsley, Craig W, Oliv

Journal:

Neuropsychopharmacology

Year:

2009

Language:

english

File:

PDF, 515 KB

english, 2009

14

A Novel Selective Muscarinic Acetylcholine Receptor Subtype 1 Antagonist Reduces Seizures without Impairing Hippocampus-Dependent Learning

Sheffler, D. J., Williams, R., Bridges, T. M., Xiang, Z., Kane, A. S., Byun, N. E., Jadhav, S., Mock, M. M., Zheng, F., Lewis, L. M., Jones, C. K., Niswender, C. M., Weaver, C. D., Lindsley, C. W., Co

Journal:

Molecular Pharmacology

Year:

2009

Language:

english

File:

PDF, 609 KB

english, 2009

15

Discovery and Development of a Potent and Highly Selective Small Molecule Muscarinic Acetylcholine Receptor Subtype I (mAChR 1 or M1) Antagonist In Vitro and In Vivo Probe

Weaver, C., Sheffler, Douglas, Lewis, L., Bridges, Thomas, Williams, Richard, Nalywajko, Natalia, Kennedy, J., Mulder, Matthew, Jadhav, Satyawan, Aldrich, Leslie, Jones, Carrie, Marlo, Joy, Niswender,

Journal:

Current Topics in Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 241 KB

english, 2009

16

ASSESSING THE IMPLEMENTATION OF AN INNOVATIVE INSTRUCTIONAL SYSTEM

EVANS, WILLIAM, SHEFFLER, JOHN W.

Journal:

Journal of Educational Administration

Year:

1976

Language:

english

File:

PDF, 652 KB

english, 1976

17

Design of a hyperstable 60-subunit protein icosahedron

Hsia, Yang, Bale, Jacob B., Gonen, Shane, Shi, Dan, Sheffler, William, Fong, Kimberly K., Nattermann, Una, Xu, Chunfu, Huang, Po-Ssu, Ravichandran, Rashmi, Yi, Sue, Davis, Trisha N., Gonen, Tamir, Kin

Journal:

Year:

2016

Language:

english

File:

PDF, 7.07 MB

english, 2016

18

Corrigendum: Design of a hyperstable 60-subunit protein icosahedron

Hsia, Yang, Bale, Jacob B., Gonen, Shane, Shi, Dan, Sheffler, William, Fong, Kimberly K., Nattermann, Una, Xu, Chunfu, Huang, Po-Ssu, Ravichandran, Rashmi, Yi, Sue, Davis, Trisha N., Gonen, Tamir, Kin

Journal:

Year:

2016

Language:

english

File:

PDF, 40 KB

english, 2016

19

Efficient Distribution Analysis via Graph Contraction

Sheffler, Thomas J., Schreiber, Robert, Pugh, William, Gilbert, John R., Chatterjee, Siddhartha

Journal:

International Journal of Parallel Programming

Year:

1996

Language:

english

File:

PDF, 2.52 MB

english, 1996

20

Computational design of self-assembling cyclic protein homo-oligomers

Fallas, Jorge A., Ueda, George, Sheffler, William, Nguyen, Vanessa, McNamara, Dan E., Sankaran, Banumathi, Pereira, Jose Henrique, Parmeggiani, Fabio, Brunette, T. J., Cascio, Duilio, Yeates, Todd R.,

Journal:

Nature Chemistry

Year:

2016

Language:

english

File:

PDF, 5.47 MB

english, 2016

21

Computational design of a homotrimeric metalloprotein with a trisbipyridyl core

Mills, Jeremy H., Sheffler, William, Ener, Maraia E., Almhjell, Patrick J., Oberdorfer, Gustav, Pereira, José Henrique, Parmeggiani, Fabio, Sankaran, Banumathi, Zwart, Peter H., Baker, David

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.16 MB

english, 2016

22

Corrigendum to “Novel GlyT1 inhibitor chemotypes by scaffold hopping. Part 2: Development of a [3.3.0]-based series and other piperidine bioisosteres” [Bioorg. Med. Chem. Lett. 24 (2014) 1062–1066]

Sheffler, Douglas J., Nedelcovych, Michael T., Williams, Richard, Turner, Stephen C., Duerk, Brittany B., Robbins, Megan R., Jadhav, Sataya B., Niswender, Colleen M., Jones, Carrie K., Jeffrey Conn, P

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2017

Language:

english

File:

PDF, 206 KB

english, 2017

23

Confirmation of intersubunit connectivity and topology of designed protein complexes by native MS

Sahasrabuddhe, Aniruddha, Hsia, Yang, Busch, Florian, Sheffler, William, King, Neil P., Baker, David, Wysocki, Vicki H.

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.26 MB

english, 2018

24

Efficient Flexible-Backbone Docking of Challenging Protein Complexes

Roy Burman, Shourya S., Marze, Nicholas A., Sheffler, William, Gray, Jeffrey J.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 44 KB

english, 2018

25

Efficient Flexible Backbone Protein-Protein Docking for Challenging Targets

Marze, Nicholas A, Roy Burman, Shourya S, Sheffler, William, Gray, Jeffrey J

Journal:

Year:

2018

Language:

english

File:

PDF, 6.27 MB

english, 2018

26

[ACM Press ACM SIGGRAPH 2018 Talks - Vancouver, British Columbia, Canada (2018.08.12-2018.08.16)] ACM SIGGRAPH 2018 Talks on - SIGGRAPH '18 - Patch-based surface relaxation

de Goes, Fernando, Sheffler, William, Comet, Michael, Martinez, Alonso, Kutt, Aimei

Year:

2018

Language:

english

File:

PDF, 19.44 MB

english, 2018

27

De novo design of a fluorescence-activating β-barrel

Dou, Jiayi, Vorobieva, Anastassia A., Sheffler, William, Doyle, Lindsey A., Park, Hahnbeom, Bick, Matthew J., Mao, Binchen, Foight, Glenna W., Lee, Min Yen, Gagnon, Lauren A., Carter, Lauren, Sankaran

Journal:

Year:

2018

Language:

english

File:

PDF, 12.33 MB

english, 2018

28

Multi-input chemical control of protein dimerization for programming graded cellular responses

Foight, Glenna Wink, Wang, Zhizhi, Wei, Cindy T., Jr Greisen, Per, Warner, Katrina M., Cunningham-Bryant, Daniel, Park, Keunwan, Brunette, T. J., Sheffler, William, Baker, David, Maly, Dustin J.

Journal:

Nature Biotechnology

Year:

2019

Language:

english

File:

PDF, 2.03 MB

english, 2019

29

Enhancing and shaping the immunogenicity of native-like HIV-1 envelope trimers with a two-component protein nanoparticle

Brouwer, Philip J. M., Antanasijevic, Aleksandar, Berndsen, Zachary, Yasmeen, Anila, Fiala, Brooke, Bijl, Tom P. L., Bontjer, Ilja, Bale, Jacob B., Sheffler, William, Allen, Joel D., Schorcht, Anna, B

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 3.39 MB

english, 2019

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